Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDNLPLDDERVELLEGDAADAATLAAALKGCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTP--ITVFGDGEQTRDFIYVADLVDFLVQA------LEATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPV----THADARA--GDIRHSRANNERLLRRFRFDQPTPMGVGLARLLGR |
| 3AW9 Chain:A ((3-281)) | -----IVVTGGAGFIGSHLVDKLVELGYEVVVVDIV---QRDT----GGSAELHVRDLKDY-SWGAGIKG-DVVFHFAANPEVR--TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYG-DADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLR-----HGVIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAE---VLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116676 for 2208 contacts (-52.8/contact) +
2D Compatibility (PS) -27578 + (NN) -3434 + (LL) 1916
1D Compatibility (HY) -20400 + (ID) 4950
Total energy: -171122.0 ( -77.50 by residue)
QMean score : 0.512
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