Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQSLLAAGVDAFGIDVGED--LLQ--------R---LVEEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKRVWLSLGLPTPDYAVLASEDDCR--EAAQRLGFPLIVKPAHEGSSIGMAKVGGLDELIAAWREAARYDSQVLVEQWISGPEFTVATLRG---QVL--PAIRLGT------PHTFYDYDAKYLASDTRYQVPCGLDEAKERELKELTARACDALGIQGWGRADVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAILADSREARG |
| 3LWB Chain:A ((7-368)) | --------------RDRRVRVAVVFGG-----AISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTDANVSLPPGAGEVLESVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLHRQECERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELECGVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTD-DGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMIETTLAR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160602 for 2464 contacts (-65.2/contact) +
2D Compatibility (PS) -33231 + (NN) -18381 + (LL) 1044
1D Compatibility (HY) -26000 + (ID) 5400
Total energy: -242570.0 ( -98.45 by residue)
QMean score : 0.523
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