Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MRQNNNITEFVLLG--FSQYPDVQNALFVMFLLIYIVTMVGNLLIVVS---IIASPFLGSPVYF---------------------FLACLSFIDAVYSTTISPVLIVDLLCDKKTISFPACMGQ------LFIEHLFGDTDVFLLVVMAYDRYVATCKPLRYLTIMNRQV-CILLLVVAVTGGFLHSVFQILVVYSLPFCGPNVIYHFFC-----NIYPLLDLECTDTYFVGLAVVFNGGAICMVIFTLLLIS--YGVILN------SLKTYSPEGRHKAPFICSSHFIMVILFFVPCIFLYVRPVSNFPIDKFLTVFYSVITPKLNPFIYMLRNSEMRNAIENLLGYQSGKTGFRCSKLN------------------------------------------------------- |
| 4C2E Chain:A ((2-436)) | ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMEDGKIIIVSPFKKSPAEKAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVS--MKIQRPGTKKQLSFRIKRAEIPLETVFASEKKVQGHSVGYIAISTFSEHTTEDFAKALRELEKKEIEGLVIDVRGNPGGYIQSVEEILK----HFVTKDQPYIQIAERNGDKKRYFSTLTHKKAYPVNVITDKGSAAASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDG------SNIKLTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGIIDTRTAETLNQQIEKKKSDEKNDLQLQTALKSLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -340733 for 2176 contacts (-156.6/contact) +
2D Compatibility (PS) -33214 + (NN) -8716 + (LL) 944
1D Compatibility (HY) 8000 + (ID) 2600
Total energy: -376319.0 ( -172.94 by residue)
QMean score : 0.091
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