Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKYIKADRFFYADH--VKENGYLEIKDNHFGKWIENI---SGQEEILDYSGYQIAPGLVDTHIHGFAGAD---VMDCDSE-----GI-LRMSAGLLSTGVTSFLPTTLTSDT-KRLEEASKSVAAVAGKEQGAKIQGIYFEGPYFTEEYKG---------------AQNPIYMRNP--NLEEFAQWQKAAKGLITKIAL-----------AP--EREGVEEFVSAITKQGVTVALGHSNGTYKEAKKAVKAGASVWVHAYNGMRGLTHREPGMVGAVYNLPNTYAELICDGHHVDPVACD--ILMT-QK----GHNHVALITDCMAAGGAPDGDYMLGELPVVVSNGTARLKDGGNLAGSILKLKDGLKNVVEWGIATPEEAVRMASYVPAVSVGIDNVCGQIKEGYAADFIVLDKHL--------DLVATYLDGEKRWQS |
| 2QS8 Chain:A ((8-411)) | -KTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGFISSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISLRDAINSGK-----LAGPRIF---AAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAV-HAHG-AEGMKRAIKAGVDSIEHGTF-MDL----------------EAMDLMIENGTYYVPTISAGEFVAEKSKIDNFFPEIVRPKAA---SV----GPQISDTFRKAYEKGVKIAFGTDAGVQKHGTNWKEFVYMVE-NGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPIEDISVLENVDVVIKDGLLYEG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100883 for 3050 contacts (-33.1/contact) +
2D Compatibility (PS) -35887 + (NN) -4970 + (LL) 1628
1D Compatibility (HY) -4400 + (ID) 3250
Total energy: -147762.0 ( -48.45 by residue)
QMean score : 0.314
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