Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSESDAANTEPEVLVEQRDRILIITINRPKAKNAVNAAVSRGLADAMDQLDGDAGLSVAILTGGGGSFCAGMDLKAFA--RGENVVVEGRG-LGFTERPPTKPLIAAVEGYALAGGTELALAADLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLPAERAHELGLVNVLAEPGTALDAAIALAEKITANGPLAVVATKRIITESRGWSPDTMFAEQMKILVPVFTSNDAKEGAIAFAERRRPRWTGT
3R9Q Chain:B ((10-249))
----------QPAVRVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHGPGPMGPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVRADRDSAIAQWGMAEEAALDNEFGSIERVAT--EALEGAG-------------
General information:
TITO was launched using:
RESULT:
Template:
3R9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120246 for 1986 contacts (-60.5/contact) +
2D Compatibility (PS) -26453 + (NN) -14195 + (LL) 1176
1D Compatibility (HY) -8000 + (ID) 4450
Total energy: -172168.0 ( -86.69 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_3R9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R9Q-query.scw
PDB file :
Tito_Scwrl_3R9Q.pdb
: