Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSASILNAQNLSKVVGSAEGKLTILHDLSLDLARGDSLAIVGSSGSGKSTLLGLLAGLDQPSGGEVRLAGHALGDLDEDQRARVRAAHVGFVFQSFQLLDSLDALENVMLPLELEG--RADARQRARELLERVGLGQRLGHYPRQLSGGEQQRVAIARAFAAEPDVLFADEPTGNLDSATGERISDLLFELNRERGTTLVLVTHDERLAHRCRRLIRLESGRLIDRVEP
1VCI Chain:A ((16-209))--------ENLTKRFGN----FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDR------NISMVFQ------HMTVYENIAFPL--KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQ-----------------------


General information:
TITO was launched using:
RESULT:

Template: 1VCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81167 for 1298 contacts (-62.5/contact) +
2D Compatibility (PS) -19991 + (NN) -12099 + (LL) 4524
1D Compatibility (HY) -14400 + (ID) 3250
Total energy: -126383.0 ( -97.37 by residue)
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_1VCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VCI-query.scw
PDB file : Tito_Scwrl_1VCI.pdb: