Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNAATAKKGSEVESVKEFLAKAKEDFLKKWENPTQNNAGLEDFERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVRLEYAFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDHQGYIQVTDFGFAKRV---KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA---DQPI----QIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNL-KNGVSDIKTHKWFATTDWIAIYQRKVEAPFIPKFRGSGDTSNFDD-YEEEDIRVSITEKCAKEFGEF |
4DC2 Chain:A ((49-364)) | --------------------------------------LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN----IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS----NTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLT------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160711 for 2402 contacts (-66.9/contact) +
2D Compatibility (PS) -31089 + (NN) -15096 + (LL) 3860
1D Compatibility (HY) -28800 + (ID) 5850
Total energy: -237686.0 ( -98.95 by residue)
QMean score : 0.578
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