Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAA-RTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
2A9K Chain:A ((17-185))
-ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKME--------------------
General information:
TITO was launched using:
RESULT:
Template:
2A9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91762 for 1338 contacts (-68.6/contact) +
2D Compatibility (PS) -18754 + (NN) -9023 + (LL) 356
1D Compatibility (HY) -18400 + (ID) 4500
Total energy: -142083.0 ( -106.19 by residue)
QMean score : 0.716
(partial model without unconserved sides chains):
PDB file :
Tito_2A9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9K-query.scw
PDB file :
Tito_Scwrl_2A9K.pdb
: