Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGT-DDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
2W9H Chain:A ((2-158))
TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLP---GHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK
General information:
TITO was launched using:
RESULT:
Template:
2W9H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102540 for 1146 contacts (-89.5/contact) +
2D Compatibility (PS) -16504 + (NN) -5049 + (LL) -56
1D Compatibility (HY) -13200 + (ID) 2700
Total energy: -140049.0 ( -122.21 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_2W9H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W9H-query.scw
PDB file :
Tito_Scwrl_2W9H.pdb
: