Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGSLNCIVAVSQNMGIGKNGDLPW-PPLRNEFRYFQRMTTTS------SVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND
3NRR Chain:A ((11-191))
GCGDLTIFVAVALNKVIGHKNQIPWPH-ITHDFRFLRNGTTYIPPEVLSKNPDIQNVVIFGRKTYESIPKASLPLKNRINVILSRTVKE-VP-GCLVYEDLSTAIRDLRA---NVPHNKIFILGGSFLYKEVLDNGLCDKIYLTRLNKEYPGDTYFPDIPDT-FEITAI-----SPTFSTDFVSYDFVIYERK-
General information:
TITO was launched using:
RESULT:
Template:
3NRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84791 for 1289 contacts (-65.8/contact) +
2D Compatibility (PS) -19039 + (NN) -7827 + (LL) -176
1D Compatibility (HY) -15200 + (ID) 2850
Total energy: -129883.0 ( -100.76 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_3NRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NRR-query.scw
PDB file :
Tito_Scwrl_3NRR.pdb
: