Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAFLILVTVTLASAHHSGEHFEGEKVFRVNVEDENDISLLHELASTRQIDFWKPDSVTQIKPHSTVDFRVKAEDILAVEDFLEQNELQYEVLINNLRSVLEAQFDSRVRTTGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPG---PNKPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTK--NRMWRKTRSTNAGTTCIGTDPNRNFDAGWCT-TGASTDPCDETYCGSAAESEKETKALADFIRNNL----SSIKAYLTIHSYSQMILYPYSYDYKLPE------NNAELNNLAKAAVKELATLYGTKYTYGPGATTIYPAAGGSDDWAYD-QGIKYSFTFELRDK-GRYGFILPESQIQATCEETMLAIKYVTNYVLGHL |
| 4IHM Chain:A ((5-313)) | ------------------------------------------------------------------------------------------------------------------YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFNVFKTMANTM----AQTNG--YTPQQGS-DLYIADGGMD-WAYGQHKI-FAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKAD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139613 for 2591 contacts (-53.9/contact) +
2D Compatibility (PS) -31433 + (NN) -18696 + (LL) 10248
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -199694.0 ( -77.07 by residue)
QMean score : 0.518
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