Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE
2VTS Chain:A ((4-287))-----FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-----------PSTAIREISLLKELN---HPNIVKLLDVIHT-----ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-------HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP


General information:
TITO was launched using:
RESULT:

Template: 2VTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -188163 for 2089 contacts (-90.1/contact) +
2D Compatibility (PS) -28427 + (NN) -16726 + (LL) 712
1D Compatibility (HY) -30800 + (ID) 6600
Total energy: -270004.0 ( -129.25 by residue)
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_2VTS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VTS-query.scw
PDB file : Tito_Scwrl_2VTS.pdb: