Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLKDSIDPVSELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHKLVKI-KYPDTTFILDIDVQIGLSRAMDKNKYEEMNISFYNKVRKGFQEIAINEPDRCSIITEIEAKDNNQVHVEIVNKVTATKPVLLRK
3HJN Chain:A ((1-192))
MFITFEGIDGSGKSTQIQLLAQYLEKRG--KKVILKREPGGTETGEKIRKILLEEEVTPKAELFLFLASRNLLV-TEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKRK---NRFE--KREFLERVREGYLVLAREHPERIVVLDG--KRSIEEIHRDVVREVKRR-------
General information:
TITO was launched using:
RESULT:
Template:
3HJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86350 for 1537 contacts (-56.2/contact) +
2D Compatibility (PS) -20940 + (NN) -16576 + (LL) 1444
1D Compatibility (HY) -15600 + (ID) 3650
Total energy: -141672.0 ( -92.17 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3HJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HJN-query.scw
PDB file :
Tito_Scwrl_3HJN.pdb
: