Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSVTFILPDGSKKSYEAAEGETLLNLAHRSDP-DLLEGACEGSLACSTCHVIIDQNFYDAVETHNPISDEENDMLDLA-FSLTETSRLGCQIKITKDIDGLCVTIPKGTRNISLDKQGND
1XLQ Chain:A ((1-105))
-SKVVYVSHDGTRRELDVADGVSLMQAAVSNGIYD-IVGDCGGSASCATCHVYVNEAFTDKVPA---ANEREIGMLESVTAELKPNSRLCCQIIMTPELDGIVVDVPDRQW----------
General information:
TITO was launched using:
RESULT:
Template:
1XLQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78199 for 795 contacts (-98.4/contact) +
2D Compatibility (PS) -11334 + (NN) -4742 + (LL) 436
1D Compatibility (HY) -8000 + (ID) 1750
Total energy: -103589.0 ( -130.30 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1XLQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XLQ-query.scw
PDB file :
Tito_Scwrl_1XLQ.pdb
: