Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEKSQACHDSLLDSVGQTPMVQLHQLF-PKHEVFAKLEYMNPGGSMKDRPAKYIIEHGIKHG-LITENTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKISPTNLKIIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAYWINQYANELNWQSHYHGAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIKEGHPNAQIVAVDAKGS-VIFGDKPINRELPGIGASRVPEILNRSEINQVIHV---DDYQSALGCRKLIDYEGIFAGGSTGSIIAAIEQLITSIE-EGATIVTILPDRGDRYLDLVYSDTWLEKMKSRQGVKSE |
3SPX Chain:A ((5-308)) | -FDKSKNVAQSIDQLIGQTPALYLNKLNNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGA--EVILTPAALG--MKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETAL---KLTRSDGVFCGFSGGANVYAALKIAERPEMEGKTIVTVIPSFGERYL--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149479 for 2698 contacts (-55.4/contact) +
2D Compatibility (PS) -32213 + (NN) -8158 + (LL) 1680
1D Compatibility (HY) -20400 + (ID) 5300
Total energy: -213870.0 ( -79.27 by residue)
QMean score : 0.495
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