Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNNFPYNGVVSFK-----DATGFVIGKNTIITNKHVSKDYKV-GDRITAHPNGDK-GNG------GIYKIKSISD--YPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAK--DAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIG--SEYNGAVYFTPQIKDFIQKHIEQ |
| 1AGJ Chain:A ((37-241)) | --------------------------------------------DRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQN-----GVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQ-MHRSEIEL-TTLSRGLRYYGFTVPGNSGSGIFNSNGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEKN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65770 for 1534 contacts (-42.9/contact) +
2D Compatibility (PS) -20304 + (NN) -9096 + (LL) 4764
1D Compatibility (HY) -11600 + (ID) 2500
Total energy: -104506.0 ( -68.13 by residue)
QMean score : 0.434
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