Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIFLIVIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHINKDDIVAYSPILEKYVGKDITLKELIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKKNKNFLLDLMFNNKNGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVI-FTNKDNKSDKPNDKLISETAKSVMKEF |
| 1IYQ Chain:A ((6-262)) | ------------------------QQLEALEKSSGGRLGVALINTADNSQILYRADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAEKHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTAPTLNTAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKTGSG-DYGTTNDIAVIWPENHA-PLVLVTYFTQPEQKAERRRD-ILAAAAKIVTHGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41407 for 2299 contacts (-18.0/contact) +
2D Compatibility (PS) -27726 + (NN) -14042 + (LL) 2800
1D Compatibility (HY) -14000 + (ID) 4700
Total energy: -99075.0 ( -43.09 by residue)
QMean score : 0.780
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