Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNKQVEISMAEWDVMNIIWDKKSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYKSENIYFYSSNIKEDDIKMKTAKTFLNKLYGGDMKSLVLNFAKNEELNNKEIEELRDILNDISKK
2FA5 Chain:A ((44-152))
----RYGMAIPEWRVITILALYPGSSASEVSDRT----AMDKVAVSRAVARLLERGFIR------RSMLALSPAGRQVYETVAPL-V--------NEMEQRLM--SVFSAEEQQTLERLIDRLAK-
General information:
TITO was launched using:
RESULT:
Template:
2FA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34857 for 644 contacts (-54.1/contact) +
2D Compatibility (PS) -10335 + (NN) -2844 + (LL) 1056
1D Compatibility (HY) -5600 + (ID) 700
Total energy: -53280.0 ( -82.73 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_2FA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FA5-query.scw
PDB file :
Tito_Scwrl_2FA5.pdb
: