Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSIGGLVDDASLTKFENPTIVEFRHIKKFITEYNALDHRPFTEKNDIEVAHEAQKNAAIVKGNDLYRFFSKLKQWAGADEKQNFRDLEEDFSLESFTHCTDFNPIEIYAYCISRSINNMENGVFLKYFLSYPIKYEKHQAEKIRESFERGLKKSLPRHVFDDEKTAKTFKVELRASEPCAYAISALKSYGFFKSEKLDKPVYYGVFDFGGGTTDFDFGKWEKRASPKFAYKMTHFSSGGDKYLGGENLLELLAWETYAKNFQTLKEKDIVIAKPNYDRIDTQLFGSFMQNSSGVRLNLQTIASQLRPFLENLDANIIEAIEENENFEIKGFEKDFKAMLFDRNGVETECDLKVDCKELLNLLKGKIEDGVANFFAGFSKVMAENIDDQCRAFHIFLGRNVSRSALVKQAFENAKEKQLKDYHQKTSKNDFKFIIYEPLGTEKSDKQILELTGEDVSNTPAYLKPTCKTGVAFGLLESRDKAQGIEMPSISSNPVFKYDLGIEIEGKFHAKIHRDSLKPNEY |
3WT0 Chain:A ((192-360)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGVDVLDVYSDAYNYGSI-LTA-T-------EKELGACVIDIGEDVTQVAFYERG---------ELVD---ADSIEMAGRDITDDIAQGLNTSYE----------------------------------------------TAEKVKHQYGHAFYDSA-------SDQDIFTVEQVD---SDETVQYTQKDLSDFIEARVEEIFF----EVFDVLQDLGLT-KVNGGFIVTGGSANLLGVKELLSDMVSEKVRIHTPSQMGIRKPEFSSAISTISSSIAFDELLD---------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31801 for 1305 contacts (-24.4/contact) +
2D Compatibility (PS) -17153 + (NN) -3161 + (LL) 20948
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -35817.0 ( -27.45 by residue)
QMean score : 0.334
|
|
|