Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMDEKDAKAIASYVMAELSSVKKTKNPQLIDKGKELFESMGCAGCHGND---GKGLQENQVFAADLTTYGTESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
1DII Chain:C ((2-74)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQWGSGKNLYDK-VCGHCHKPEVGVGPVLEGRGL---------PEAYIKDIVRNGF----RAMPAFPASYVDDESLTQVAEYLSSLP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34171 for 471 contacts (-72.5/contact) +
2D Compatibility (PS) -7705 + (NN) -5371 + (LL) 14876
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -39271.0 ( -83.38 by residue)
QMean score : 0.490
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