Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMDEKDAKAIASYVMAELSSVKKTKNPQLIDKGKELFESMGCAGCHGND---GKGLQENQVFAADLTTYGTESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED
1DII Chain:C ((2-74))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQWGSGKNLYDK-VCGHCHKPEVGVGPVLEGRGL---------PEAYIKDIVRNGF----RAMPAFPASYVDDESLTQVAEYLSSLP----


General information:
TITO was launched using:
RESULT:

Template: 1DII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34171 for 471 contacts (-72.5/contact) +
2D Compatibility (PS) -7705 + (NN) -5371 + (LL) 14876
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -39271.0 ( -83.38 by residue)
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_1DII.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DII-query.scw
PDB file : Tito_Scwrl_1DII.pdb: