Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTPEFKAMMEAVKKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVKTE-----------------------DEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
2LJ4 Chain:A ((5-118)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------SEKLRAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGE-----VSFEEAASQRSDCG-SYA--SGGDLGFFSSGEMMKPFEDAVRALKIGDIS-PIVQTDSGLHIIKRLA---------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2LJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26394 for 689 contacts (-38.3/contact) +
2D Compatibility (PS) -10042 + (NN) -6155 + (LL) 16920
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -30771.0 ( -44.66 by residue)
QMean score : 0.493
|
|
|