Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMTSFIFEVVEKLG---IKEKGYKLLTNVGKNAGQEVMHLHFHILSGDKH
3N1S Chain:A ((4-109))
ETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPL
General information:
TITO was launched using:
RESULT:
Template:
3N1S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56863 for 709 contacts (-80.2/contact) +
2D Compatibility (PS) -11106 + (NN) -5965 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -82484.0 ( -116.34 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_3N1S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N1S-query.scw
PDB file :
Tito_Scwrl_3N1S.pdb
: