Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISHFEPVTVVA-SSSQYVNARYMLSD------EIRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFG-DPNDELAREKLQQLYPNCEVVGVKAREIL--LGGGNIHCITQQVPR----------------------------------------------------------------------------------------------------------- |
| 4YTB Chain:A ((1-422)) | -AFQETNPPAGPVRAIAEYERSAAVLVRYP-------------FGIPMELIKELAKNDKVITIVASESQKNTVITQYTQSGVNLSNCDFIIAKTDSYWTRDYTGWFAMYDTNKVGLVDFIYNRP----------RPNDDEFPKYEAQYLGIE-MFGMKLKQTGGNYMTDGYGSAVQSHIAYT---ENSSLSQAQVNQKMKDYLGITHHDVV--QDPNGEYINHVDCWGKYLAPNKILIRKVPD-NHPQHQALEDMAAYFAAQTCAWGTKYEVYRALATNE---------------------------QPYTNSLILNNRVFVPVNGPASVDNDALNVYKTAMPGYEIIGVKGASGTPWLGTDALHCRTHEVADKGYLYIKHYPILGEQAGPDYKIEADVVSCANATISPVQCYYRINGSGSFKAADMTMESTGHYTYSFTGLNKNDKVEYYISAADNSGRKETYPFIGEPDPFKFTCMNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140928 for 2642 contacts (-53.3/contact) +
2D Compatibility (PS) -33324 + (NN) -12942 + (LL) 2480
1D Compatibility (HY) -6800 + (ID) 3400
Total energy: -194914.0 ( -73.78 by residue)
QMean score : 0.411
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