Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKEEMNARQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHRE-----MKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVREEIEDVIGL------------------------------------------------------------------------------------DASDAVLASAKSGIGIEDILEQIVEKVPEPSGD---------VNKPLKALIFDSVFD--AYRGVIANIRIMDGVVKAGDRIKMMSNGKEFEVTEVGVFSP-KATPRDELLVGDVGYLTAAIKNVGDTRVGDTITLANNPAEEALDGYRKLNPMVYCGLYPIDSSKYNDLRDALEKLELNDSALQFE-AETSQALGFGFRCGFLGLLHMEIIQERIEREFNIDLITTAPSVI-YHVNLTDGSNIVVDNPAEMPEPGVIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLDDIRVSIVYEIPLSEIVYDFFDQLKSSTKGYASFDYELIGYKASKLVKMDILLNAEKVDALSFIVHRDFAYERGKIIVEKLKELIPRQQFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK |
| 3TR5 Chain:A ((6-513)) | -----VEKQTAMRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGTIKSR--HATSDWMELEKQRGISVTTSVMQFPYK-----DYLINLLDTPGHADFTEDTYRTLTAVDSALMVIDAAKGVEPRTIKLMEVCRLRHTPIMTFINKMDRDTRPSIELLDEIESILRIHCAPVTWPIGMGKYFKGIYHLIEDAIYLYQPGKHERVGESERIEGINNPELDKKLGDLASELRNEIELVKGASHPFEREGYLKGELTPIFFGSAINNFGVGELLDAFVKEAPPPQGRETNSRLVKPEEEKFSGFVFKIQANMDGHRDRIAFLRIASGQYQKGMKAYHVRLKKEIQINNALTFMAGKRENAEEAWPGDIIGLH----NHGTIQIGDTFTQGER---FKFTGIPNFASELFRLVRLKDPLKQKALLKGLTQLSEEGATQLFRPLDSNE-----LILGAVGLLQFDVVAYRLENEYNVKCVYESVNVVTARWVIC-----------------------DD-------------KAVLERFNQE--QSRNLAYD--GGGHLTYLAPSRVN-LEIT----------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187287 for 3274 contacts (-57.2/contact) +
2D Compatibility (PS) -43374 + (NN) -9699 + (LL) 15600
1D Compatibility (HY) -20800 + (ID) 5200
Total energy: -250760.0 ( -76.59 by residue)
QMean score : 0.468
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