Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEILLQKVYDQENLSKEEMNIIATEIFEGRLSKTKMAAFLMALKVKGETAEEMAGIAQAMQQVAIQVAFP--AGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINLRPEDMTYLLEKVGIAFLFAPHVHPNMKYVMDVRKELGTPTIFNLIGPLTNPVHLETQLMGIYRRDLLEQTAEVLGQLGRKRAVVLNGAGFMDEASLAGENHYALYENGEVHLYTLRPEDVGLTSYPLEAITGGDAKENAAILRSVLEGE-PGAYLDTVLLNAGFGLFANGKVE--TVQEGVDLAKDLISSGLAKQKLADLITYQKEVLAK
1VQU Chain:A ((27-374))WYLLLQQLIDGESLSRSQAAELMQGWLSEAVPPELSGAILTALNFKGVSADELTGMAEVLQSQSKM---TNSPFSIIDTCGTG---SSTFNISTAVAFVAAAYGVPVAKHGNR--SSLTGSADVLEALGVNLGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNLGKQKAIVLHGRERLDEAGLGDLTDLAVLSDGELQLTTINPQEVGVTPAPIGALRGGDVQENAEILKAVLQGKGTQAQQDAVALNAALALQVAGAVPLLDHAQGVSVAKEILQTGTAWAKLAQLVYFLGN----


General information:
TITO was launched using:
RESULT:

Template: 1VQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180520 for 2955 contacts (-61.1/contact) +
2D Compatibility (PS) -35692 + (NN) -20685 + (LL) 1036
1D Compatibility (HY) -26400 + (ID) 6750
Total energy: -269011.0 ( -91.04 by residue)
QMean score : 0.626

(partial model without unconserved sides chains):
PDB file : Tito_1VQU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VQU-query.scw
PDB file : Tito_Scwrl_1VQU.pdb: