Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTN---RNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI
2DXD Chain:A ((8-153))
-ERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELFEYPRAAD---
General information:
TITO was launched using:
RESULT:
Template:
2DXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69369 for 1074 contacts (-64.6/contact) +
2D Compatibility (PS) -15411 + (NN) -4038 + (LL) 620
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -107998.0 ( -100.56 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2DXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXD-query.scw
PDB file :
Tito_Scwrl_2DXD.pdb
: