Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLKKRISQITEETPAEEIAVLVEEVKKTGAKQAEDVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY |
| 3IPI Chain:A ((8-283)) | ----------WEEYRYVEAGIKESITLIEDPGLKKMVEHVCHSGGKRIRPIILLLVSEICSG-SYSRSLNAALAVEMMHSASLIHDDLLDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKSIAFISPYG-EKVIQDFGKAGMDMAEGEVLDLK--------ENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEFLEVV--EG-----------ETLPHIYMKSTSKEE-------------------------ALKKSIDCVKLHVAAAKETLETFRECPARDKLFQITDYITVDM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144707 for 2174 contacts (-66.6/contact) +
2D Compatibility (PS) -27763 + (NN) -11411 + (LL) 4260
1D Compatibility (HY) -15200 + (ID) 3600
Total energy: -198421.0 ( -91.27 by residue)
QMean score : 0.545
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