Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIAVLGGAGYIGSHAVDELITR-GYEVVVIDNLRTGH---------R---ESI-----------HKKAKFYEGDIRDKAFLSSVFEKE-KVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSSAATYGEPER--VPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALG-----QREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYLKN------GGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPAEVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY |
| 1GY8 Chain:A ((3-382)) | MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD-DKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182115 for 2859 contacts (-63.7/contact) +
2D Compatibility (PS) -35617 + (NN) -18830 + (LL) 120
1D Compatibility (HY) -30800 + (ID) 7700
Total energy: -274942.0 ( -96.17 by residue)
QMean score : 0.617
|
|
|