Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQLFFRYGSMNSGKTIEILKVAHNYEEQNKTVAIFTSGIDDRDQVGFISSRIGLKREATPIFSDTNIFEIVVNIKPKPNCVLLDESQFLEKEHVFQLAKIVDELNIPVIAYGLKNDFRNELFEGSKYLLLYADKLEEMKTICWFCAKKATMVLRVDDKGKPV-YTGEQIMIGGNDHYYPVCRKCHANPPIK
1XX6 Chain:A ((8-190))
-GWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE-------EDVVSHMGEKEQAVAIKNSREILKY---FEEDTEVIAIDEVQFFDDEIVEIVNKIA-ESGRRVICAGLDMDFRGKPFGPIPELMAIAEFVDKIQAICVVCGNPATRTQRLI-NGKPAFYDDPV-----MESYEARCRKCHVVP---
General information:
TITO was launched using:
RESULT:
Template:
1XX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81386 for 1335 contacts (-61.0/contact) +
2D Compatibility (PS) -18428 + (NN) -7045 + (LL) 1148
1D Compatibility (HY) -8800 + (ID) 2450
Total energy: -116961.0 ( -87.61 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_1XX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XX6-query.scw
PDB file :
Tito_Scwrl_1XX6.pdb
: