Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VAESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGSGKSTIAKLLNGLLFPEDGLIKIGHFVLSEKNIWEIRRQVGMVFQNPDNQFVGATVQDDVAFGLENHGV-----------PHDTMVERV----ESALNEVGMQSYALHEPARLSGGQKQRVAIAGVLALQPDVIILDEATSMLDPRGRAEVMETIRIMREQEDITVISITHDLDEVLFADRVIVMNKGEIHSEGTPKEIFQQADAMREIGLGVPFIIELQEKLVAGGFETGSTVLSEGALLDQLWKLNSNN |
4S0F Chain:B ((489-710)) | -----IEFRNVDFRY-GLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQ--DVFIFSGTVKENLCLGNENVDMDEIIKAAKMANAHD-FIEKLPLKYDTFLNESG---------ANLSEGQKQRLAIARALLKKPDILILDQATSNLDSITENHIKDAIYGL--EDDVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTEL---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106001 for 1548 contacts (-68.5/contact) +
2D Compatibility (PS) -22530 + (NN) -4199 + (LL) 5020
1D Compatibility (HY) -16800 + (ID) 3850
Total energy: -148360.0 ( -95.84 by residue)
QMean score : 0.412
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