Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLFKTIGIIGGGQLGQMMAIAAIYMGHKVITLDPASDCSASRVSEV-IVAPYDDVEALGQLAARCDVLTYEFENVDADGLDAVVS-AGQLPQGTDLLRISQNRIFEKDFLANKAGVTVAPYKVVTSSLDLEG--FDLTKTYVLKTATGGYDGHGQKVIRSAEDLPEAQQLANSAECVLEEFVDFDLEISVIVSGNG-QDVTVFPVQENIHRNNILSKTIVPARISDQLADKAKKMAVQIAKELQLSGTLCVEMFVTA-DDIIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGQPLPPIKL-HAPAVMLNVLGQH-VQQAIDYVAENPSAHLHIYGKLEA---KHNRKMGHVTVFTEDADEVEEF |
| 3ORQ Chain:A ((10-368)) | -KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCEKYNIP-QGYQAIQLLQDRLTEKETLK-SAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIETSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHRNQILFKTIVPARID--KTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLLGKDLDL-LENEFNEHPEWHLHIY---GKSERKDSRKMGHMTVLTNDVNQTEQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ORQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186240 for 2937 contacts (-63.4/contact) +
2D Compatibility (PS) -38351 + (NN) -17725 + (LL) 220
1D Compatibility (HY) -25200 + (ID) 8300
Total energy: -275596.0 ( -93.84 by residue)
QMean score : 0.505
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