Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVVVNQASTGVEVVEHDLPKVGHGEALVKVEYCGVCHTDLHVAHGDFGQ----VPGRILGHEGIGIVEEIGEGVTSLRVGDRVSI--AWFFEGCGHCEYCTTGRETLCRS-----VKNAGYSVDGGMSEYAVV-TADYAVKVPEGLDPAQASSITCAGVTTYKAIKEAGA--APGQWIAVYGAGGLGNLAVQYAKKVFNAHVVAVDINADKLQLAKEVGADLTVNGKEIKDVAAYIQEKTGGCHGVVVTAV--SKVAFNQAIDSVRAGGTVVAVGLPSEYMELSIVKTVLDGIRVVGSLVGTRKDLEEAFAFGAEGLVVPVVEKVPVDTAPQVFDEMERGLIQGRKVLDFTK |
| 2XAA Chain:C ((1-343)) | MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLP-LTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPW---GCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAV--KSGAGAADAIRELTGG-GATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHTETFTLDEGPAAYRRLREGSIRGRGVVVP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204119 for 2849 contacts (-71.6/contact) +
2D Compatibility (PS) -36018 + (NN) -8822 + (LL) -116
1D Compatibility (HY) -17600 + (ID) 6100
Total energy: -272775.0 ( -95.74 by residue)
QMean score : 0.523
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