Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKVRLYIARHGKTMFNTIGRAQGWSDTPLTTFGELGIKELGLGLKASNISFKEAFSSDSGRTLQTMEIILREVQQENIPYTRDKRIREWCFGSLDGGYDGDLFNGVLPRVS-NGDMSHLT----HEEIANL----------ICQVDTAGWAEPWAILSNRILSGFTAIAKKIEDIGGGNAIVVSHGMTIATFLWLIDHSTP---RSLGIDNGSVSVVDFEDG-TFSIQSIGD-MSYREKGREILEKTLQ |
1QHF Chain:A ((1-237)) | ---PKLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETL-KKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDL-LSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPSYYLDPEAAAAGAAAV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58955 for 1725 contacts (-34.2/contact) +
2D Compatibility (PS) -22750 + (NN) -4647 + (LL) 740
1D Compatibility (HY) -3600 + (ID) 2150
Total energy: -91362.0 ( -52.96 by residue)
QMean score : 0.335
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