Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDTMILNDNHKIPTLGLGTWM---INNDRVAQVVKDAIELGYRHINTAQAYNNEKGVGVGIK----ESGITRESLFVTTKIAAEHKNYESATKSIDQSLEALGLDCIDLMIIHSPQPWKEWRETDKHFDQGNL
3C3U Chain:A ((10-119))
------LNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKI
General information:
TITO was launched using:
RESULT:
Template:
3C3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38781 for 706 contacts (-54.9/contact) +
2D Compatibility (PS) -10719 + (NN) 569 + (LL) 648
1D Compatibility (HY) -8800 + (ID) 2050
Total energy: -59133.0 ( -83.76 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_3C3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3U-query.scw
PDB file :
Tito_Scwrl_3C3U.pdb
: