Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKG---SELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
2VFE Chain:A ((2-244))-ARKYFVAANWKCNGTLES----IKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHSERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLI--DNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIKSAM


General information:
TITO was launched using:
RESULT:

Template: 2VFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -88089 for 1938 contacts (-45.5/contact) +
2D Compatibility (PS) -26358 + (NN) -10645 + (LL) 912
1D Compatibility (HY) -21200 + (ID) 4500
Total energy: -149880.0 ( -77.34 by residue)
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_2VFE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VFE-query.scw
PDB file : Tito_Scwrl_2VFE.pdb: