Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLAPVLTIAGTDPSGGAGIMADLKTFQARRTYGMAVVTSVVAQNTCGVRGVQHIETAIIDQQLACVYDDIKPKAVKTGMLAERETISLVASYLKKY---PQPYVLDPVMVATSGHRLIDSDAVEALKEDLLPLATIITPNLPEAEILVGYD--LSDEVSIIKAGYDIQKQYSVRNVLIKGGHLDG--LAKDYLFLEKE-GLITLSNQRINTIHTHGTGCTFAAVVAAELAKGQSILNAVSTAKSFITSAIETAPELG----LGNGPVNHTSYQGD |
| 3RM5 Chain:A ((20-295)) | -EKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYSINNTPKEVVFQTLESNLKDMKCNVIKTGMLTA-AAIEVLHEKLLQLGENRPKLVVDPVL---------GKDIVSLITEKVAPFADILTPNIPECYKLLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGH---EKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVAIGCDVTKETVKDNGPINHVYAVEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143268 for 2167 contacts (-66.1/contact) +
2D Compatibility (PS) -26974 + (NN) -5802 + (LL) 948
1D Compatibility (HY) -20800 + (ID) 4650
Total energy: -200546.0 ( -92.55 by residue)
QMean score : 0.477
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