Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNP-KDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
4ANE Chain:F ((3-133))
-ERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEH--------LLEFITSGPVVAAIVEGTNAIAAVRQLAGGTDPVQAAAPGTIRGDFAL-----ETQFNLVHGSDSAESAQREIALWFPG
General information:
TITO was launched using:
RESULT:
Template:
4ANE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69288 for 947 contacts (-73.2/contact) +
2D Compatibility (PS) -12683 + (NN) -1466 + (LL) 76
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -98561.0 ( -104.08 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_4ANE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ANE-query.scw
PDB file :
Tito_Scwrl_4ANE.pdb
: