Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKQVFPKGFLWGGATAANQCEGAYNVDGRGLANVDVVPTGEDRFAIISGQKKMFDFEEGYFYPAKESIDFYHHYKEDLALLAEMGFKTYRMSIAWTRIFPKGDELYPNEAGLRFYENIFKECRKYGIEPLVTITHFDCPIYLIKHYGGWRSRKMIGFYERLVRALFTRFKGLVKYWLTFNEINMI--------LHAPFMGAGLYFEDGENQEQIKYQAAHHELVASAIAVKIAHEVDPNNQIGCMLAAGQYYPNTCHPQDYWAS--MQKNRENYFFIDVQTRGKYP----NYAKKYFEHLGISIQMTAEDLALLRDYTVDFISFSYYSSRVASGNPTVSEQVQENIFASLKNPYLKSSEWGWQIDPLGLRITLNAIWDRYQKP-MFIVENGLGAVDIPDENGYVEDDYRIDYLRQHIAAMRDAIYVDGVNLIGYTTWGCIDLVSAGTGEMEKRYGFIYVDRNNKGEGTLKRYKKKSFYWYKKVIASNGSQIE |
2CBU Chain:B ((28-465)) | -----FPEGFLWGVATASYQIEGSPLADGAGMSIWHT-------FSHTPGNVKNGD-------TGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEGTGRV-NQKGLDFYNRIIDTLLEKGITPFVTIYHWDLP-FALQLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAP----------GMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLP------ENYKDDMSEIQE-KIDFVGLNYYSGHLVKFDPDA--KV------SFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQ-EGVPLKGYFVWSLLDNFEWAEG-YSKRFGIVYVDYS-----TQKRIVKDSGYWYSNVVKNNGL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214898 for 3670 contacts (-58.6/contact) +
2D Compatibility (PS) -44051 + (NN) -10734 + (LL) 3508
1D Compatibility (HY) -31200 + (ID) 7650
Total energy: -305025.0 ( -83.11 by residue)
QMean score : 0.476
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