Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPD-------YQKMLMSVMQD---PGMDKKYSQLAKSQE------FRSYLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE |
4LEU Chain:A ((71-252)) | KLIGKEALFVILGLKRL-------KEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEETALAIKMFEVIQKQ-----------EWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPPEE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22690 for 1204 contacts (18.8/contact) +
2D Compatibility (PS) -17448 + (NN) -6903 + (LL) 980
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -9231.0 ( -7.67 by residue)
QMean score : 0.412
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