Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKSRGLVRFFFSILA------------VGALITSIVGFALKWGEYRGLF------LTFEAGQIFSVLFWFIGVGMIFSVISQMGFFVFLTVHRFALEILRSSSLWNLLQLFFILF------VAFDL-MYVRFLFFGESG-ESLAGYAWLPVFLLIFG--------VITAYIKQKQSSKKTFV-SSLFLMVVITA--LEWFPALRVNDEDWLYLMLFPL--MACNAFQLLML--PKFAAK---------- |
| 2VVE Chain:A ((3-254)) | QEQTTKSRDVNSFQIPLRDGVRELLPEDASRNRASIKSPVDIWIGGENMTALNGIVDGGRKFEAGQEFQINT-FGSVNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAFYITEGDETTDTLIKYTSYGSTGSHSGYDFDDNTLDVMVTLSAGVHRVFPVETELDYDAVQEVQHDWYDESFTTFIEVYSDDPLLTVKGYAQILMERT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176251 for 1292 contacts (-136.4/contact) +
2D Compatibility (PS) -20852 + (NN) 6073 + (LL) 156
1D Compatibility (HY) 400 + (ID) 2450
Total energy: -192924.0 ( -149.32 by residue)
QMean score : 0.152
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