Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKIKYLYQLLLSHISILILAFVIIISLFSHFVKEFAYQNKVEELTSYAVQIANEFQSGQVDMRRLYPYQDILSTRKTQFIIFNEEQQPYFLPEGFHHPPREQLKKSEWNKLKKGQTVTIRADGRFDDEVSLVAQPIFVQNEFKGAVLLISPISGVEQMVNQVNLYMFYAVISTLVITILVSWLLSKFHVKRIQKLREATDKVASGDYDIHLENSYGDEIGVLASDFNIMAKKLKQSRDEIERLEKRRRQFIADVSHELKTPLTTINGLVEGLNSHTIPEDKKDKCFSLISEETKRMLRLVKENLDYEKIRSQQITLNKLDVPLIEVFEIVKEHLQQQAEEKQNKLMIQV--EDHVIVHADYDRFIQILVNITKNSIQFT-Q------------NGDIWLRGMEGYKETIIEIEDTGIGIPKEDI------------------------EHIWERFYKADISRTNTAYGEYGLGLSIVRQLVEMHQGTVEIKSEEGKGTKFIIRLPLTAKQQ
1B3Q Chain:A ((65-249))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFS-------------GVGMDVVKNVVESLNGSMGIESEKDKGTKVTIRLPLTL---


General information:
TITO was launched using:
RESULT:

Template: 1B3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 622 -77103 -123.96 -571.13
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -123.96
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_1B3Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B3Q-query.scw
PDB file : Tito_Scwrl_1B3Q.pdb: