Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFHISTLDQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNE-VIGNHSG-NGR-WRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKV--FPGIKAIGC-CH-EVFGTQKLLAEMVTERLGIEVPRREDIRVNVLGIN---HFTWITKASYRH-IDLLPIFREFSAHYGESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRKQDRAEKRQETERLIVQQRGVAEKASGEEGVNIIAALLGLGELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILSGALPKGVEMLAARHISNQEAVADAGLTKDTGLAFQAFLNDPLVQIDRSDAEQLFNDMLQCIMQS
4PLZ Chain:A ((4-304))--------KAKIVLVGSGMIGGV--MATLIVQ-KNL-GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKV-SGSNTYDDLAGADVVIVTAGF--------------RDDLL---------------PLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKL------NVCP-RDVNAHIVGAHGNKMVLLKRYITV-GGIPLQEFINNKL------------------------------------ISD-------AELE-AI---FDR-------TVNTALEIVNL--------HAS---PYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQY-G-HSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDE---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PLZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1496 -240659 -160.87 -865.68
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -160.87
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_4PLZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PLZ-query.scw
PDB file : Tito_Scwrl_4PLZ.pdb: