Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFPVELDNVTVAYHK-----KPVLQDISLQVPEGKLIGIIGPNGAGKSTLIKTILGLVPRASGDISIYGKDYK---------DQRTRIGYVPQRGSVDWDFPTSPLDVVLMGRYGRIGLLKRPKKADVEMAKAALTKVGMH-DYAKRQISQLSGGQQQRVFLARALCQNADIYFMDEPFAGVDAATERAIMTLLAELKE-KGKTVLVVHHDLQTAEDYFDWILLLHLRK-IAFGPTENVFTIENLQKTYGGRLTFLKDKVLAEGHKE
4HUQ Chain:A ((2-245))--AIAFEHVTYTYQAGTPMAHTALTDVSLTVPDRGYLAIIGHTGSGKSTLIQQLNALLKPTSGTIKIDEFTITPETTNAALKPLRQHVGMVFQFPENQ-LFEETVRQDIAFGPKNF----GMADADALALADEMLTTVGLDQSYAERSPFELSGGQMRRVAIAGVLAMQPKVLVLDEPTAGLDPQGRQEMMRLFARLHQEQGLTIVLVTHQMEDVAQYAEQVAVMHEGRLMKFGTPADVFSNREWLQDHQL----------------


General information:
TITO was launched using:
RESULT:

Template: 4HUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1161 -24455 -21.06 -107.73
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -21.06
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_4HUQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HUQ-query.scw
PDB file : Tito_Scwrl_4HUQ.pdb: