Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLNLQGKTALVTGSTSGIGKAIASSLAEEGAAVIINGRREEKVNQTIDELKTQHAEAVLYPAAFDLGTEEGCNELFQA----YPEVDILVNNLGIFEPAEYFDIPDDEWFRFFEVNIMSGVRLTRRYLH--NMIEKKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSISRSLA-ELATGTNVTVNTVMPGSTLTEGVETMLNSLYPGENLTVQEAEARFMKENRPTSIIQRLIRPEEIAHFVTFLSSPLSSAINGAALRADGGLVRSVF
3QRW Chain:A ((27-278))-------EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA--DGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR-TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR----VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL-----


General information:
TITO was launched using:
RESULT:

Template: 3QRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1333 -70086 -52.58 -286.07
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -52.58
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_3QRW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QRW-query.scw
PDB file : Tito_Scwrl_3QRW.pdb: