Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP
5AIG Chain:A ((3-123))
----------PIETVTAFIAH----WNSGDMEAMYDLCAEDVVWHNIPMEPIAGKPAMRAAVEGFMANVSQ---CDWQVHAIAANGA--TVLTERTDGFTF-TNGRRATIRVMGTFECDAERRIIAWRDYFDMLEFQREFA--------------------------
General information:
TITO was launched using:
RESULT:
Template:
5AIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45808 for 856 contacts (-53.5/contact) +
2D Compatibility (PS) -13516 + (NN) -7672 + (LL) 2900
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -68796.0 ( -80.37 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_5AIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AIG-query.scw
PDB file :
Tito_Scwrl_5AIG.pdb
: