Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLARLRGRRVVPQRSAGELDAMAAAGAVVAAALRAIRAAAAPGTSSLSLDEIAESVIRESGATPSFLGYHGYPASICASINDRVVHGIPSTAEVLAPGDLVSIDCGAVLDGWHGDAAITFGVGALSDADEALSEATRESLQAGIAAMVVGNRLTDVAHAIETGTRAAELRYGRSFGIVAGYGGHGIGRQMHMDPFLPNEGAPGRGPLLAAGSVLAIEPMLTLGTTKTVVLDDKWTVTTADGSRAAHWEHTVAVTDDGPRILTLG
3IU7 Chain:A ((50-286))
--------------------IEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDST-VITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYAN----RFG--YNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILT--
General information:
TITO was launched using:
RESULT:
Template:
3IU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142864 for 2090 contacts (-68.4/contact) +
2D Compatibility (PS) -26425 + (NN) -13137 + (LL) 2152
1D Compatibility (HY) -18800 + (ID) 4500
Total energy: -203574.0 ( -97.40 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3IU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IU7-query.scw
PDB file :
Tito_Scwrl_3IU7.pdb
: