Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWL--TGGEELLDALLSTVPWR---AERRQMYDRVVDVPRLVSFH----------DLTIEDPPH-PQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGR--------GPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR
3BTX Chain:A ((1-204))
-------------------ASWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDHVSGVTG----QTFNFVLINRYKDGSDHIGEHRDD-CRELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILL-
General information:
TITO was launched using:
RESULT:
Template:
3BTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82016 for 1314 contacts (-62.4/contact) +
2D Compatibility (PS) -19448 + (NN) -9003 + (LL) 1748
1D Compatibility (HY) -10400 + (ID) 2550
Total energy: -121669.0 ( -92.59 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3BTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BTX-query.scw
PDB file :
Tito_Scwrl_3BTX.pdb
: