Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MRVAVLSGAGISAESGVPTFRDDKNGLWARF---DPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAWQDH-AEVSVITQNVDDLHERAG--SGAVHHLHGSLFEFRCARCGVPYTDALPEMPEPAIEVEPPVC-DCGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSA-----TISIRESASQALPGLLERLPALLK-- |
| 1ICI Chain:A ((1-256)) | GSHHHHHHGSHMDEKLLKTIAESKYLVALTGAGVSAESGIPTFR----GKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGSR--NVIHLHGSLRVVRCTS--CNNSFEVESAP-KIP--PLPKCDKCGSLLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDE----TP-LTPIADYSLRGKAGEVMDELVRHVR--KALS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ICI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104700 for 1797 contacts (-58.3/contact) +
2D Compatibility (PS) -23736 + (NN) -11803 + (LL) 440
1D Compatibility (HY) -14000 + (ID) 4800
Total energy: -158599.0 ( -88.26 by residue)
QMean score : 0.528
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