Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSLDNTADEKPAIDPILLKVLD-AVPF-RLSIDDGIEAVRQRLRD-LPRQPVHPELRVVDLAIDGPAG-PIGTRIYWPPTCPDQAEAPVVLYFHGGGFVMGDLDTHDGTCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPSTLWDQSLPSLAENADAPILDVKAIAAFSRWYAGEIDLHNPPAPMAPGRAENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAGVVPAATEATNRGLVALRVVLHG |
| 3QH4 Chain:A ((8-312)) | ----------VDRLDPLLRAVATARIDFTAESILTIRESMNQRRREAAATETAAAGVAVADDVVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTA-SRSEFRATPAFDGEAASLMWRHYLAGQT---PSPESVPGRRGQLAGLPATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214904 for 2750 contacts (-78.1/contact) +
2D Compatibility (PS) -33179 + (NN) -20581 + (LL) 72
1D Compatibility (HY) -10800 + (ID) 5550
Total energy: -284942.0 ( -103.62 by residue)
QMean score : 0.571
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