Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRL-------------AADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
4BO0 Chain:B ((31-268))
------------------LVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGA--GLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGI-----------DEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM--
General information:
TITO was launched using:
RESULT:
Template:
4BO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114513 for 1666 contacts (-68.7/contact) +
2D Compatibility (PS) -23074 + (NN) -7035 + (LL) 2416
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -164506.0 ( -98.74 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_4BO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO0-query.scw
PDB file :
Tito_Scwrl_4BO0.pdb
: